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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50908361, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATALASRVE SWARDQAARL PAWARPRPPS AAAAAVPRWP WPWPWSWSWP PPPRAPAWPG  60
   61 DRRRQRERAF REEFERRRRQ LRELCRAVRV DTVAELQELL CAVVLAECVY KRPVSEMMRY 120
  121 INKFKSDFGG HIVSLERVQP SLDHVGHRYV LAEAGDTLFA TFIGTKQYKD IIADVNILQG 180
  181 TVFHEDTAQD LADAVECVQN DDQKGEENLG TSYREKSKQL RKSKPAAHRG FLARANGIPA 240
  241 LELYKLAQKK NRKLVLCGHS LGGAVAALAT LAILRVLASS SPSKEPDRLQ VKCITFSQPP 300
  301 VGNAALRDYV HRRGWQDYFK SYCIPEDLVP RILSPAYFHH YNAQTPDNTN AKSDEEKDTK 360
  361 SVCSKENNGE QLVLGVGPVQ KSLWRLSKLV PLEGVRKSLS VLQKQTNSFG KAPSQLDNFL 420
  421 QSKVDESEEG LQSLEIQEGS EGIALTPLSD KDGGLTEENN KTDKTNVSEV GGSKRWNRVP 480
  481 SLPSYVPFGE LYLLGDSSVN TLSDSEYSKM TSVQSVITEL RERLQSHSMK SYRARFQKIY 540
  541 DICMSANAQL FTGIEQLPQF SHLQELLGLT AADSVELGHI VEPPTIRTAT SILPLGWNGY 600
  601 PGDKSAEPLK VDIIGHDLHM CTLFQAQING NWYSTVIETL PMVSYSSDQE VQPTLQKMRI 660
  661 LVGQPLKQPP NYISEDFMVS VATGTGSNPD YGFDSLFEDK GCCKGLNEFL IYGTSDFVTI 720
  721 CKEVYVRTRR VRLLGLEGAG KTSLLKALLG QFKERSKAVL ECIHVDLHGK GVSNGLCYVD 780
  781 SATVNLQELP LEVRQFKEEL QLGIHDLSRK TDLVIVVHNL AHRIPQYHQS NTSQPQPALS 840
  841 LLLDEAKALG IPWILAITNK FSVSAHEQNA LITSAMEAYQ ASPDMTKVVN SSPFLMPSAT 900
  901 NSLRPISSAS GSLRNENPSG RAAFYPVNFS LSPFQRKDIV MHVEGVTALR QLVHQVIHSN 960
  961 EEPAFEELSR ERLSLELERE KAASLQGKRK PQKRDGSVTA AAVGASLGAG LGVVMAVIMG1020
 1021 AASALRKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle