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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47497547, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPAHPPPCG VAPAAAATCP LFLLPRRSLS RSLHLRLRRL SLPAPRAASH AHDAVLLRRA  60
   61 ADAADRSAGL TSPHPNFGCV IARPQLETDN AEAWVVGEGF LYAQGTPCAE LLAAQEAGEH 120
  121 ARGATAYLNL EPGDCYGDST AVSTLVQAGI TRVVVGLRHP LKHLRGKAIQ SLRNEGIQVD 180
  181 VVGEDLHSKL FKEALKSCLI VNAPLLYRAA FRVPFSVLKY AMTADGKIAA SSGHASWVSG 240
  241 KSSRGRVFEL RGRSDAIIVG GNTVRLDDPR LTARHVKGHV PVRIVMSQSL NLPEEANLWN 300
  301 VHDAYTIVAT QRGARRDLQK KLALKGVEVV EFDMLNPRDV MSYCYDRGYL SVLWECGGTL 360
  361 AASAISASVI HKVYAFLAPK IIGGVNAPTP VGELGMNQMT QAIDLIDVSY EQIDRDMLMS 420
  421 GFIQPIPDLS PVIPSVDEMP SVDPEVSPYE TNIISFYKTW DTFGAFSNFS PHPIHMPDEN 480
  481 GDYFTWPTVE HYYQAHKFIG VDDPQAREIV QEIKLAKSPE EAARIGRTRQ REFQELVRPD 540
  541 WDSIKIEVMY RATKRKFSTY SHLTDMLLST AGSVLVEASP HDLFWGGGRE GEGMNYLGRL 600
  601 LMQLRSEILG TIQTAVEVGE PA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle