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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37654330
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLCVLVWAS LAACPIWGHP SSPPVVDTTK GKVLGKYVSL EGFTQPVAVF LGVPFAKPPL  60
   61 GSLRFAPPEP AEPWSFVKNT TTYPPITGDE HSRGNWAHLD QLAALRWVQD NIANFGGNPD 120
  121 SVTIFGESAG GVSVSVLMIA TLSGCNNTSS AAMVQCLRQK TEAELLELTV KLDNTSMSTV 180
  181 IDGVVLPKTP EEILTEKSFN TVPYIVGFNK QEFGWIIPTN ISESVIPAII EKYLRGTHDP 240
  241 AKKKELLLDM FSDVFFGIPA VLMSRSLRDG GAPTYMYEFQ YRPSFVSDHR PQTVQGDHGD 300
  301 EIFSVFGTPF LKEDLGRGLF DQFSSVPSAD LDSRFLQLTA PVFLCPEALC SFLLGQECEQ 360
  361 SDSEKTQKQI SKTKGTLECD IFTPRKEGMA DEHGQQRSKL MRKLYKASGL PWGRAQERQD 420
  421 TCLRHPRNLK ETDWINSSLH PNPMGGRAKP SERQTSLGNQ KRLLPAHTSR TPEEKAKDHL 480
  481 EPWCTEAPGR GGTGLPGCCR CREPLGSTPR ANLSLGTTEI AEQSNTRDNL MARGKRRNPS 540
  541 NRNQDYMPSS EPNSPTKTNM EYPNTPEKQD LVSKSYLIMM LEDFKKDMNT LRETQENINK 600
  601 QVEAYREESQ KSLKEFQENT IKQLKELKME IEAIKKEHME TTLDIENQKK RQGAVDTSFT 660
  661 NRIQEMEERI SGAEDSIEII DSTVKDNVKR KKLLVQNIQE IQDSMRRSNL RIIGIEESED 720
  721 SPLKGPVNIF NKIIEENFPN LKKEIPIDIQ EAYRTPNRLD QKRNTSRHII VKTPNAQNKE 780
  781 RILKAVREKG QVTYKGRPIR ITPDFSPETM KARRSWTDVI QTLREHKCQP RLLYPAKLSI 840
  841 NIDGETKIFH DKTKFTQYLS TNPALQRIIN EFQENISKQV EAHREETQKS LKEFQEKTIK 900
  901 QLKELKMEIE AIKKEHMETT LDIENQKKRQ GAVDTSFTNR IQEMEERISG AEDSIEIIDS 960
  961 TVKDNVKRKK LLVQNIQDSM KRSNLRIIGI EESEDSQLKG PVNIFNKIIE ENFPNLKKEI1020
 1021 PIGIQEAYRT PNRLDQKRNT SRHIIVKTPN AQNKERILKA ETHLRDKDRH YLRVKGWKTT1080
 1081 FQANGQKKQA GVSILISNKI NFQLKVIKKD KEGHFIFIKG KIHQDELSIL NIYAPNTRAP1140
 1141 TYVKETLLKL KTHIAPHTII VGDFNTPLSS MDRSWKQILN SDVDRLREVM SQMDLTDIYR1200
 1201 TFYPKAKGYT FFSAPHGTFF KIDHIIGQKT GLNRYRKIEI IPCVLSDHHG LKLVFNNNKG1260
 1261 RMPTYTWKMN NALLNDNLVK EEIKKEIKNF LEFNENEDTT YSNLWDTMKA VLRGKLIALS1320
 1321 ACRKKQERAY VSSLTAHLKA LEQKEANTPR RSRRQEIIKL RAEINQVETK RTIERINRTK1380
 1381 SWFFEKINKI DKPLARLTRG HREYVQINKI RNEKGDITTD SEEIQKIIRS YYKNLYSTKL1440
 1441 ENLQEMDNFL DRYQVSKLNQ EQINQLNNPI TPKEIEAVIK GLPTKKSPGP DGFSAEFYQT1500
 1501 FIEDLIPILS KLFHKIETDG ALPNSFYEAT ITLIPKPHKD TTKKENFRPI SLMNIDAKIL1560
 1561 NKILANRIQE HIKTIIHHDQ VGFIPGMQGW FNIRKTINMI HYIKKLKEQN HMIISLDAEK1620
 1621 AFDKIQHPFM IKVLERIGIQ GPYLNIVKAI YSKPVANIKL NGEKLEAIPL KSGTRQGCPL1680
 1681 SPYLFNIVLE VLARAIRQQK EIKGIQIGKE EVKISLFAHD MIVYLSDPKS STSELLKLIN1740
 1741 NFSKVAGYKI NSNKSVAFLY TKEKQAEREI RETTPFIIDP NNIKYLGVTL TKQVKDLYNK1800
 1801 NFKTLRKEIE EDLRRWKDLP CSWIGRINIV KMAILPKAIH RFNAIPIKIP IQFFKELDRT1860
 1861 ICKFIWNNKK PRIAKAILNN KRTSGGITIP ELKQYYRAIV IKTAWYWYRN RQIDQWNRIE1920
 1921 DPEMNPHTYG HLIFDKGAKT IQWKKDSIFS KWCWFNWRAT CRRMQIDPCS SPCTKLKSKW1980
 1981 IKDLHIKPDT LKLIEEKLGK HLEHMGTGKN FLNKTPMAYA LRSRIDKWDL IKLQSFCKAK2040
 2041 DTVVRTKRQP TDWEKIFTNP TTERGLISKI YKELKKLDRR ETNNPIKKWG SELNKEFTAE2100
 2101 ECRMAEKHLK KCSTSLVIRE MQIKTTLRFH LTPCDWLRSK TQVTADAGED VEKEEHSSIV2160
 2161 GRNWKEPRCP STEEWIQKMW YIYTMEYYSA IKNNEFMKFV GKWLELENII LSELTQSQKD2220
 2221 IHAPYLETLI RKPGHFLYWC QGWGVPKARA FQSLLNSARS EELPHFIKQQ FVLRFHGINQ2280
 2281 NQHHSLLGLS SSWYPAEGSI GTKDRAFLHS PGEAVGVAEM V

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