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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114145427, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAVATAGV LMGSEPGPAE ELAKLEYLSL VSKVCTELDN HLGINDKDLA EFVISLAEKN  60
   61 TTFDTFKASL VKNGAEFTTM LDEEDVKVAV DVLKELEALM PSAAGQEKQR DTEHRDRTKK 120
  121 KKRSRSRDRD RDRDRDRDRD RDRDRDKDRE RDRDRERDRE RDRDRDHKRR HRSRSRSHSR 180
  181 TRERAKGKSR YRSRSRSQSP FKDRKDREKY GERNLDRWRD KHVDRPPPEE PAIGDIYNGK 240
  241 VTSIMQFGCF VQLEGLRKRW EGLVHISELR REGRVANVAD VVSKGQRVKV KVLSFTGTKT 300
  301 SLSMKDVDQE TGEDLNPNRR RNLVGETNEE TSMRNPDRPT HLSLVSAPEV EDDSLERKRL 360
  361 TRISDPEKWE IKQMIAANVL SKEEFPDFDE ETGILPKVDD EEDEDLEIEL VEEEPPFLRG 420
  421 HTKQSMDMSP IKIVKNPDGS LSQAAMMQSA LAKERRELKQ AQREAEMDSI PMGLNKHWVD 480
  481 PLPDAEGRQI AANMRGIGMM PNDIPEWKKH AFGGNKASYG KKTQMSILEQ RESLPIYKLK 540
  541 EQLVQAVHDN QILIVIGETG SGKTTQITQY LAEAGYTSRG KIGCTQPRRV AAMSVAKRVS 600
  601 EEFGCCLGQE VGYTIRFEDC TSPETVIKYM TDGMLLRECL IDPDLTQYAI IMLDEAHERT 660
  661 IHTDVLFGLL KKTVQKRQDM KLIVTSATLD AVKFSQYFYE APIFTIPGRT YPVEILYTKE 720
  721 PETDYLDASL ITVMQIHLTE PPGDILVFLT GQEEIDTACE ILYERMKSLG PDVPELIILP 780
  781 VYSALPSEMQ TRIFDPAPPG SRKVVIATNI AETSLTIDGI YYVVDPGFVK QKVYNSKTGI 840
  841 DQLVVTPISQ AQAKQRAGRA GRTGPGKCYR LYTERAYRDE MLTTNVPEIQ RTNLASTVLS 900
  901 LKAMGINDLL SFDFMDAPPM ETLITAMEQL YTLGALDDEG LLTRLGRRMA EFPLEPMLCK 960
  961 MLIMSVHLGC SEEMLTIVSM LSVQNVFYRP KDKQALADQK KAKFHQTEGD HLTLLAVYNS1020
 1021 WKNNKFSNPW CYENFIQARS LRRAQDIRKQ MLGIMDRHKL DVVSCGKSTV RVQKAICSGF1080
 1081 FRNAAKKDPQ EGYRTLIDQQ VVYIHPSSAL FNRQPEWVVY HELVLTTKEY MREVTTIDPR1140
 1141 WLVEFAPAFF KVSDPTKLSK QKKQQRLEPL YNRGEGMRVL YTELRSWKAQ DCWTNYGCTY1200
 1201 RYSFRLLPES 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle