YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34103143, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSIETFTIT GNKTMRPLHR LAIALLLAGS ASAFAEVTLL NVSYDPTREL YQDYNAAFAK  60
   61 YWKAKTGETV AVKQSHGGSG KQARSVIDGL EADVVTLALA YDIDEIASQA KTIAPNWQQR 120
  121 LPNNASPYSS TIVFLVRKGN PKHIKDWNDL VKSGVEVVTP NPKTGGGARW NYLAAWGYAL 180
  181 KQPGGNDAKA KDFVKKLYGN VKVLDSGARG SLITFTQRGI GDVLLSWENE AFLATKELGP 240
  241 DKFDIVTPSV SILAEPPVSV VDKVADKRGT RKVAEAYLRY LYSPEGQALA AKHYYRPRDP 300
  301 QVAAKYAGQF SKVKLFTIDQ TFGGWQKAQK THFADGGVFD QIVAR

Type	Start	End	Confidence
Signal Peptide	1	35	0.98
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	345	0.99