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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34102977, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNKAAGTA RSLNCSRANN PCHRMIVELT LVLSLLQQMC VYLVIAYLLS KTPLFIPLTQ  60
   61 ITLQLPHKLV CYLVFSMFCI MGTYFGLHIQ DSIANTRAIG AVLGGMLGGP WVGLAVGFTG 120
  121 GLHRYSLGGL TAGACMVSTM MEGLLGGLVH LYLVRRGLRA RLFDPLVVAA VACVAEIGQM 180
  181 LILLALVRPS EAAERLVASI ALPMMAANTL GAAMFMRILL DRRVLAEKYS TAFSGKALQI 240
  241 AARAEGVLRQ GFDPENSMTV ARILYEELGV GAVAITDRER LLAFIGIGAD HHLPGTAITS 300
  301 PHTHRAIERN EVVYADGNET PYRCSISPQC RLASSLVIPL RGEDERVIGT IKLYEPRNKL 360
  361 FSRINLTLGE GIARLLSAQI LQGQYDKQKQ LLAQTEIKLL HAQVNPHFLF NALNTLSAVI 420
  421 RRNPEHARRL VQYLSTFFRK NLKRSGEAAT LEDEIEHVSA YLRIEEARFA GRLDVEISLD 480
  481 EAARRARLPA FSLQPIVENA IKHGTSQLLE AGRIRIAARC ADGRLCVTVE DNAGLYAPAG 540
  541 PGDGLGMSLV DRRIRARHGP AYGVSVECEP EAYTRVTLSV PCPEPGEIPC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle