YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34497052, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWRRGVKRL ERIIMKVIRP LLVVFGGLSL ITGLAYPLVT TGIAQAAFPA QANGSLIEKD  60
   61 GKVVGSRLIG QNFAGEQYFW GRPSATSPMP YNAGNSGGSN LGPTNPAQLA AVKGNVEAIR 120
  121 KAHPTQTGPV PVDLVTASAS GLDPEISVAS AYYQVDRVAA ARKLPADAVR KLVDGRIVGE 180
  181 TFGLLGEPRV NVLELNLALD ELSKKA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.73
Transmembrane Helix	21	39	0.77
Non-Cytoplasmic	40	206	0.97