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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34496725, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFHVLTKK ETALKTKTLT VLLASLLSGS ALAADIPLRD FFRNPEQSNF TVSPDGRSVA  60
   61 FLSPWESRRN IVVRRPGQPD KRVTAIKDRD LSGYFWKGND RLVYVKDNAG DENFHLYSVD 120
  121 LKSGKTRDLT PFPGVRAEIV DGLIDNDRQL LISLNKRKPE IFDVYRIDLQ TGQLTLEAEN 180
  181 PGKVASWITD HKGNIRIAIE TDGVNNTVLY RDQPGGKFRK LMTTNFRENF TPLFFTFDNQ 240
  241 RFYAASSLGR DKAAIVEYDP KTGKEAKEIY ARQDVDVSSL DYSHKRKVIT CAGFETDKPG 300
  301 RECFDPQARE LYARLQAHFP GYQVDITSGS RNEDRFVVAA WSDKTQGKRY LYDKKRDKLT 360
  361 LLAEITPWLP EDKMASMKPI QYRSRDGLTI NGYLTLPRGK EDAKDLPVIV NPHGGPWYRD 420
  421 SWRFNPEVQF FASRGWAVLQ MNFRGSTGYG RQFWEASFKE WGGKMQDDVT DGVDWLVKQG 480
  481 VADPKKVCIY GGSYGGYATL SGITKTPELY RCAVDYVGVS NLFTFMKTIP PYWKPFLDSM 540
  541 YEMVGHPEKD KELLRERSPV FHVDRIQSPL LVLQGAKDPR VNINESNQIV EALKKRGVDV 600
  601 EYIVKDNEGH GFHNEENRFA AYGAMERFFK KYLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle