YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34496718, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTLGEQAGT LLSVGDAKHA GTALSLFDFG PEDMAEVADF PIADLAAYRL RGEVMWLNVY  60
   61 GLSDAAAIQA IGERFGLHPL VQEDILNARQ RPKLEDYDDY LFLACRVFDY QQGARLQSDQ 120
  121 MYLVLGDGFV LTFQEKPTGV FEQVRERLRK GRGALRRRGA DYLAYSLLDA IIDDYFGVLG 180
  181 QFNDKVERAD GQLLAGRDNG VLRQIQRLKR DCLKLRRALL PLREALLSLN RGDDERFGDD 240
  241 TRVYLRDAYD HVVHVLESLE MNREMVGDMM DLYLSTQSHR LNLQMRVLTV ITMIFMPLTL 300
  301 IAGIYGMNFE NMPELKWHYG YYIVLLAMGG ISAGMGWWFW KRRWI

Type	Start	End	Confidence
Cytoplasmic	1	286	0.95
Transmembrane Helix	287	307	0.94
Non-Cytoplasmic	308	318	0.84
Transmembrane Helix	319	340	0.95
Cytoplasmic	341	345	0.92