YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34496373, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKFLDHLEE WMIACLMGAA TLITFVAVLH RYGSGIPALQ PYLAHINLSW AQELTVYLFV  60
   61 WMAKFGAAYG VRTGIHVGVD VLINRLPDRT RARFIVFGLL AGALFTGAIA VMGGDFVWNI 120
  121 AHTDQTSPDL EAPMWLVYLA IPAGSTLMCF RFLQVAWNFV KTGDLPKHDH GHVEGIEGNE 180
  181 ALDNLHPHDM HHGGRP

Type	Start	End	Confidence
Cytoplasmic	1	10	0.94
Transmembrane Helix	11	33	0.91
Non-Cytoplasmic	34	53	0.84
Transmembrane Helix	54	75	0.74
Cytoplasmic	76	93	0.83
Transmembrane Helix	94	114	0.94
Non-Cytoplasmic	115	133	0.89
Transmembrane Helix	134	153	0.94
Cytoplasmic	154	196	0.96