YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37528750
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRSFLVQV VVLLILGTLV AEAAIIRGRP KGQGTKKTNV LVNEKGPING QYPVKRPNPV  60
   61 KGQDPVKGQD PVEGQDPVKG QDPVKGQDPV KGQDPVKGQD PVKGQDPVKG QDPVKGQDPV 120
  121 KGQDPVKGQD PVKGQDPVKG QDPVKGQDPV KGQDPVKGQD PVKGQDLVKG QDPVKGQDPV 180
  181 KGQGPVKGQD PVKGQDPVKG QDPVKGQDRV RGPLLTKRGS CPRVLIRCAM MNPPNRCLRD 240
  241 AQCPGAKKCC EGSCGKTCMD PQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	262	0.99