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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STLP4_ORYSJ
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLPLALAA AIFSGVTAIL VYLSGLSSYG GARVSDADLA ALGALQSGFS KCVDANGLGL  60
   61 KAIPGEDYCR VVIQYPSDTD SKWKDPKTGE PEGLSFEFNL CEAVASWEQV RNSTTILTKE 120
  121 YIDALPNGWE EYAWRRINKG IHLNKCQNRT LCMEKLSLVL PETPPYVPRQ FGRCAVVGNS 180
  181 GDLLKTKFGD EIDSYDVVIR ENGAPIQNYT EYVGTKSTFR LLNRGSAKAL DKVVELDETK 240
  241 KEALIVKTTI HDIMNQMIRE IPITNPVYLM LGTSFGSSAK GTGLKALEFA LSMCDSVDMY 300
  301 GFTVDPGYKE WTRYFSESRK GHTPLHGRAY YQMMECLGLV KIHSPMRGDP GRVVKWAPTK 360
  361 DTIEAARVAS EKLLKRPGAG SEGPLSSCTM IKKREKGKTP KRSVVRHAAL KHLEYMRGAT 420
  421 RYPLERNAGG GYLCMINER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle