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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113535187, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATVPVLLL VTVLSLILPS GIGAAAAGDE RSALLALKAG FVDTVSALAD WTDGGKASPH  60
   61 CKWTGVGCNA AGLVDRLELS GKNLSGKVAD DVFRLPALAV LNISNNAFAT TLPKSLPSLP 120
  121 SLKVFDVSQN SFEGGFPAGL GGCADLVAVN ASGNNFAGPL PEDLANATSL ETIDMRGSFF 180
  181 GGAIPAAYRS LTKLKFLGLS GNNITGKIPP EIGEMESLES LIIGYNELEG GIPPELGNLA 240
  241 NLQYLDLAVG NLDGPIPPEL GKLPALTSLY LYKNNLEGKI PPELGNISTL VFLDLSDNAF 300
  301 TGAIPDEVAQ LSHLRLLNLM CNHLDGVVPA AIGDMPKLEV LELWNNSLTG SLPASLGRSS 360
  361 PLQWVDVSSN GFTGGIPAGI CDGKALIKLI MFNNGFTGGI PAGLASCASL VRVRVHGNRL 420
  421 NGTIPVGFGK LPLLQRLELA GNDLSGEIPG DLASSASLSF IDVSRNHLQY SIPSSLFTIP 480
  481 TLQSFLASDN MISGELPDQF QDCPALAALD LSNNRLAGAI PSSLASCQRL VKLNLRRNKL 540
  541 AGEIPRSLAN MPALAILDLS SNVLTGGIPE NFGSSPALET LNLAYNNLTG PVPGNGVLRS 600
  601 INPDELAGNA GLCGGVLPPC SGSRSTAAGP RSRGSARLRH IAVGWLVGMV AVVAAFAALF 660
  661 GGHYAYRRWY VDGAGCCDDE NLGGESGAWP WRLTAFQRLG FTCAEVLACV KEANVVGMGA 720
  721 TGVVYKAELP RARAVIAVKK LWRPAAAAEA AAAAPELTAE VLKEVGLLGR LRHRNIVRLL 780
  781 GYMHNEADAM MLYEFMPNGS LWEALHGPPE RRTLVDWVSR YDVAAGVAQG LAYLHHDCHP 840
  841 PVIHRDIKSN NILLDANMEA RIADFGLARA LGRAGESVSV VAGSYGYIAP EYGYTMKVDQ 900
  901 KSDTYSYGVV LMELITGRRA VEAAFGEGQD IVGWVRNKIR SNTVEDHLDG QLVGAGCPHV 960
  961 REEMLLVLRI AVLCTARLPR DRPSMRDVIT MLGEAKPRRK SGSSTGSASA KAPTPAPPAV1020
 1021 AAVVDKDKPV FTTTPDSDYA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle