YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227011491, gi...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METNLDSDCA EMMDVCMTRL LSFLFVVLFS AAASSKTLLV LGDSLSAGYE MPIEQAWPSL  60
   61 LAEELVEQGQ TVTVVNGSIS GDTTGNGLAR LPSLLSQHQP DTVLIELGAN DGLRGFPPQT 120
  121 VTHNLTTMIE QIQAKNAKVI LMQIRIPPNY GKRYSDAFYQ IYPSLAEQFS IPLIPFFLEQ 180
  181 VILKPEWMMA DGLHPKPEAQ PWIAKFVAEH LAAHL

Type	Start	End	Confidence
Cytoplasmic	1	19	0.58
Transmembrane Helix	20	35	0.72
Non-Cytoplasmic	36	215	0.87