YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15642716, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRAASQPCC WLCVFFRRES HAFGVTMSTP QDLSHLLPDV INIARAAGQL ILDIYQNKSY  60
   61 EAFTKSDSTP VTSADLAAHK FLCEQLRELT PDIPILSEEE ANIDLATRET WQRYWLVDPL 120
  121 DGTQEFIARS GDFATIIALV ENNHPVMGVV YGPVSGVTYY AYAGKGAWKI PDMAQSLKIQ 180
  181 THKHELPSSS IAIAISRRQD INKITRRLSS AWNYDLVPLG SAALKACLVA EGAVDCYLRL 240
  241 GPTGEWDTAA TQCIVEEAGG RILSTQLSPL SYNERETLEN PNFIVLGDAD LPWNEILKIK 300
  301 D

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	301	0.99