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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|153222038, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLFHRLLL HLSSCFYFLL LSLILESVMT MMIKPVSLAV LGGLLAMAGP VMADTIKLRI  60
   61 VETTDIHTNL MDYDYYKDKA SDQIGLTRAA TLVKQARAEV ENSVLVDNGD LIQGSPMGDY 120
  121 MAAKGIKAGE VHPVYKAMNP LGYDVGNIGN HEFNYGLEFL KETINDAAFP YINANVFDAK 180
  181 TGQHLFTPYV IKEHSFKDTD GEAHTIKVGY IGFVPPQIMV WDKKNLEGKV TAADIKQTAE 240
  241 KLIPEMKAKG ADVIVAIPHS GISTDEYQAG AENSVYYLTQ VKGIDAIAFG HSHAVFPGKD 300
  301 FANVPGADID KGTINGVTAV MPGRWGSHVG VMDLTLEKQQ GRWAVTSGQS EARPIFDKAN 360
  361 KKALVEADAT MVQALQHDHQ GTRDFVNQPI GKANDVMYSF LSLVQDDPTV QIVNLAQKDY 420
  421 VERFIQGDPN LDGLPVLSAA APFKAGGRKD DPNGFTEVEA GELTFRNAAD LYLYPNTLVT 480
  481 MKVSGQQLKE WLECSAGQFN QIDVTSSAPQ SLINWDGFRT YNFDVIDGVN YQIDVTQPAR 540
  541 YDGDCKLINP NSQRIVQLTY QGKPIDTQQT FLIATNNYRA YSNKFPGTGA EFVAFDSPDE 600
  601 NRTVVADYIA RVSKDKGEVT PSADNNWSFA PISSKTKLDI RFETSPSDKA TQFIKQKGQY 660
  661 PMTRVASDDV GFAVYRIDLQ K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle