YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229606910, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIHILGICG TFMGGVAMLA RQLGHKVTGS DANVYPPMST MLEAQGIEII EGFDPVQLEP  60
   61 KPDLVVIGNA MSRGNPCVEY VLNHNLRYTS GPQWLQDFLL HDRWVIAVSG THGKTTTSSM 120
  121 IAWVLEHCGY QPGFLVGGVL GNFGISARLG ESMFFVVEAD EYDSAFFDKR SKFVHYHPRT 180
  181 LVMNNLEFDH ADIFDNLEAI KRQFHHLVRT VPGNGRILAP KQDEALADVL QRGCWSETEF 240
  241 SGEQGEWQAE KITADGSQFH VLLKGERVGQ VNWSLVGDHN VSNALMAIAA ARHVGVAPEL 300
  301 ACEALGLFVN TKRRLELKGE INGVTVYDDF AHHPTAIELT LGGLRNKVGD KKIIAVLEPR 360
  361 SATMKLGVHK ETLAASLHSA DSVYLYQPSN IPWSVEEVAK QCQQPAQVSA NMDEFVAMIA 420
  421 KEAQAGDQIL VMSNGGFEGI HGKLLAALQQ K

Type	Start	End	Confidence
Signal Peptide	1	19	0.63
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	451	0.98