YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|153221986, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRNPRVSAF FFQCLRRSCM IALLRILAVA VFAVYMFVFG CGYCLFSPRN PKHVYTFGKQ  60
   61 FAAMSKVFGI KLEYRAPADV DQRGQHIYIA NHQNNWDLFT VSKAVTPKVV TVGKKSLAWM 120
  121 PLFGQLYWLT GNILIDRANK AKAKGTIDQV VDSMKQSDVS VWMFPEGTRS RGRGLLPFKA 180
  181 GAFHAAIGAG VPIIPIVCSS TDKLKFNRWN NGHVIVEVLP PISTEGYSKE NIRELSQHCY 240
  241 DLMKAKLAQL DAEVAELNRK A

Type	Start	End	Confidence
Cytoplasmic	1	20	0.92
Transmembrane Helix	21	43	0.90
Non-Cytoplasmic	44	261	0.78