YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|121586208, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFTNWILKV SMVIWFRVSV FPISIFNYER SKQVRNWLVA LASLLLLAGC EKPAEQVHLS  60
   61 GPTMGTTYNI KYIQQPGIAD SKTLQTEIDR LLEEVNDQMS TYRKDSELSR FNQHTSSEPF 120
  121 AVSTQTLTVV KEAIRLNGLT EGALDVTVGP LVNLWGFGPE ARPDVVPTDE ELNARRAITG 180
  181 IEHLTIEGNT LSKDIPELYV DLSTIAKGWG VDVVADYLQS QGIENYMVEI GGEIRLKGLN 240
  241 RDGVPWRIAI EKPSVDQRSV QEIIEPGDYA IATSGDYRNY FEQDGVRYSH IIDPTTGRPI 300
  301 NNRVVSVTVL DKSCMTADGL ATGLMVMGEE RGMAVAEANQ IPVLMIVKTD DGFKEYASSS 360
  361 FKPFLSK

Type	Start	End	Confidence
Signal Peptide	1	50	0.44
N-region	1	41
H-region	42	47
C-region	48	50
Cleavage Site	50	51
Non-Cytoplasmic	51	367	0.93