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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75817004, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKSLISIA VFTSLSGCAL NTTSPQEVVD TLANNLDVQY QVVNNHGADT GLACQTLEAE  60
   61 WASCNQVNMT LVNRGEAVNS KDWAIYFHSI RLILDVGNDQ FKITRVTGDL HKLEPTDKFD 120
  121 GFAAGETVTL PLIGEYWTLF ETDFMPRAFV TAPDAEPKVI AALNTEDVAS FVSGLEGENL 180
  181 KRTPSDNNVF AQALSRFEKN SDVALQDVTH ALIPTPLQVK SHSGSVSIAK GIALPSKAFD 240
  241 GEQMQALNER AQLLGVNLKG VMPAQVIINP KSFKGDLAKS GAYRLAITDK AVKVTAFDQA 300
  301 GAFYAMQSLL GLVDMADATQ LPKVEIVDAP RFDYRGVMVD VARNFHSKQA ILATLDQMAA 360
  361 YKMNKLHLHL TDDEGWRIEI PGLPELTDIG AQRCFDPSET ECVLPQLGSG PNADNFGSGY 420
  421 FTKQDYLEIL QYAKARHIEV IPEIDMPAHA RAAVVSMEAR YQRLMQEGNE AAANEFRLLD 480
  481 PQDTSNVTTV QFYDRMSFIN PCLDSSKRFV DKVISEIAAM HQAAGMPLTT WHFGGDEAKN 540
  541 IKLGAGFQDV NTQEPVSWKG NLDLSKQDKP FARSPQCQNL IATGAVSDFG HLPSYFAEQV 600
  601 SKLVAEKGIP NFQAWQDGLK YSEGEKAFAT ENTRVNFWDV LYWGGSASAY EWAEKGYDVI 660
  661 ISNPDYVYMD MPYEADPKER GYYWATRATD TRKMFGFAPE NLPQNAETSL DRDGNGFSGK 720
  721 GEVKGKPFYG LSAQLWSETV RTDEQYEYMV FPRVLAAAER AWHRAEWENA YKVGVEYSQE 780
  781 TQLVNHKALN ADWNRFANVL GQRELAKLEK AGIDYRLPVP GAKIENGHLA MNVQFPGVTL 840
  841 QYSLDGQTWL DYDAKQAPKV SGEVWIRSVS ASGERTSRVT SLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle