YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|183012970, gi...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKPEKRKMH PKIDLHSHFI TKCRAFCEIF YSFIGFLLFF FSLAANAATP EQLSMIKEAA  60
   61 ENHVLSTVDM PAGGELVVNA ANIDDRLFAT DCPEPLTTNS SSSNGSAANI TVLVECKPDN 120
  121 WRVYVPVRLT ITIPLITAAT PLSRGQMISA QDVTLSMVDL LRFRRQGFST PENVIGAKIK 180
  181 KNIRVGDVIE QNDVCIVCRN ESVVIRAGKS GMSITTKGTA MSDGVVGEQI KVKNDKSNRI 240
  241 IDAQVSGVGE VTVAF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.77
Transmembrane Helix	21	45	0.69
Non-Cytoplasmic	46	255	0.97