YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9656677, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEDLGTEA PKGKKKLLII IIAAVVLLAG GGGAAFFMMG SGGDEAAADA EQKTEQVAAP  60
   61 TDPVSYVNIA QPFVFNVTGD AKDRLVQIKV QLMVRGSENE NLARYHSPLV ESSLLATFAS 120
  121 ATVEQLRTPN GRIELRDKAT DDIKAALNQA VGKPVIEKVL FTDFVMQ

Type	Start	End	Confidence
Cytoplasmic	1	16	0.89
Transmembrane Helix	17	39	0.88
Non-Cytoplasmic	40	167	0.85