YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|121628012, gi...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHKRITITL VWLIIVFIAM FGVYRFEKPK KFKLPLLRGE VVGAAPDFSA IHDIAERKEA  60
   61 FFNYLKPGVR YENSRILQER TLLKRIKKDF ADGQLSSHNL AQAQHLATAY SVALTENNVD 120
  121 NAWLQEMFHR VDVVPEALVL TQAANESAWG TSRFAKEANN YFGQWCYSAG CGLVPLARAE 180
  181 GAFHEVAKFD SVQDSIQSYF MNVNRNPAYR ELREIRFQLR QQKINPNSDE SAKAMSNGLL 240
  241 KYSERGEAYV RDLQAMMLAN QEYWNDN

Type	Start	End	Confidence
Cytoplasmic	1	7	0.60
Transmembrane Helix	8	26	0.85
Non-Cytoplasmic	27	267	0.79