YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|121547977, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFVWQHKLV LVSCAQPAVF HSAKSLKRCL NSDRNVSMSL ADQVLAVNDD LPIRTHQPVH  60
   61 SGKVRSVYWL TEQDSRRLIK EKGYPVAEDA PLAIMVISDR ISAFDCIWHA EGGVHGVPGK 120
  121 GAALNAISNH WFKLFKQHGL AESHILDIPH PFVWIVQKAR PIKIEAICRQ YITGSMWRAY 180
  181 AKGEREFCGI TLPEGLEKDS QLPELLMTPS TKGILRGIPG VPEADDVNIS RQDIEANYAA 240
  241 FNFNQPQDID HYETLLKQGF AVISEALKSV GQLFVDTKFE FGYVADQQGQ QKLIYMDEVG 300
  301 TPDSSRIWDA QQYQQGKIVE NSKEGFRQFL LNYFPDPDIL LNKDRMPERE ALARDNALPL 360
  361 EALMDISRTY LGIAEKITGQ PIHLSHQPKQ EIIAILDKEY GLIER

Type	Start	End	Confidence
Signal Peptide	1	22	0.88
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	405	0.99