YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124117549, gi...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.32
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIISQVFSP EGQRVLTMQF TKWFIALPLA VTALSGCSLL ERLVYRIDIN QGNYVDQQSV  60
   61 DQLKFGMSKD QVRFVLGSPM LVENGYPDTW YYIYHHTQGH NDPVQKNLIV KFNDGGKLVN 120
  121 VAGDFPAGDS FFEGVN

Type	Start	End	Confidence
Cytoplasmic	1	19	0.32
Transmembrane Helix	20	40	0.62
Non-Cytoplasmic	41	136	0.65