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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229357964, gi...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMAKNLIL WLVIAVVLMS VFQSFGPGEN NGRAVDYTTF VKEVGQGQIQ EAQFNNGEIT  60
   61 FMRRGGGSRY VTYMPVYDQK LLDDLINQDV KVQGTPPEEQ SLLGTIFISW FPMILLIGVW 120
  121 IFFMRQMQGG GGKGAMSFGK SKARMMSEDQ IKTTFSDVAG CDEAKEDVKE LVDYLRDPSR 180
  181 FQKLGGKIPT GVLMVGPPGT GKTLLAKAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKASPC IIFIDEIDAV GRQRGAGVGG GHDEREQTLN QMLVEMDGFE GNEGIIVIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVGLPDVRG REQILKVHMR KVPLANDVEP SLIARGTPGF 360
  361 SGADLANLVN EAALFAARGN KRNVSMVEFE LAKDKIMMGA ERRSMVMSEE IKESTAYHEA 420
  421 GHAVVGRLVP EHDPVYKVSI IPRGRALGVT MYLPEQDRVS MSKQHLESMI SSLYGGRLAE 480
  481 ELIYGKEKVS TGASNDIERA TEIARKMVTQ WGFSEKLGPM LYAEDEGEVF LGRSVTQTKH 540
  541 MSDDTAKLID DEVRQIIDRN YERARQIIMD NMDIMHAMKD ALMKYETIDA GQIDDLMARK 600
  601 PVIREPAGWG EQSKTPSAPE VKAEPEAKAE ESTAETASSD VATASEKKDA E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle