YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229353770, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIKVIITS QKEYSMKKLL SLSAITLSVL APSAFAAQEV NVYSYRQPFL IEPMFAEFTK  60
   61 ETGIKVNVKF AKEGIAEKLA QEGEYSPADV ILTSEFSRLF ELTEKGLTQP LDSKVIEENI 120
  121 PAQYRDSGDE WFALTQRTRS VYSSRDRLGK LGDDFDYMDL AKPEFKGKIC TRSGKHPYNI 180
  181 ALVASIIANH GEAEAKAWLE GVKANLARKP QGNDRDQVRA IKEGLCDVSL GNSYYLGAML 240
  241 NDQEQKSWAE AVYINFPGQN VQGTHVNVSG MAMAKYSPNR ENAQKLMEFL TGETAQKMYA 300
  301 EVNYEYPVKP GVQRSALVES WGEFKADSLP LEKIADNNAA AIKLIDEVKF DL

Type	Start	End	Confidence
Signal Peptide	1	36	0.99
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	352	0.99