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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|147673465, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKWLAKTLV GLGCFALLSA YALAFQDIDH SIYFPSVVQG HGSCSGAPNP QLIQYNSARI  60
   61 NGTNNSVVDF CSINATNERP NTRCDNNLCQ VSGNTVPSLS LAGINAFKTS SVSGTEIGWC 120
  121 NSGQSILLSK TNIGTVQLYA SCTLSFTGQT EYKIKSLDMG SGATLVLSSG DYWIESLQLN 180
  181 QGGEVVVDGD VRLFIRNNSD WNSAQINVSG SGNLTIVGYN NITLNQSNQV KAYLYVGGTL 240
  241 TLHNTSVING RVTSRRLFME ANTEINQNEQ QGYACFTDDF NRSSLGQNWI PYTSSGNFTP 300
  301 SIISNRMRLT EAITNQATAV TYQRIFPAAG NLVTVEFDYY AWANLTGNGA DGVSVIFSDA 360
  361 TVTPRTGGFG GSLGYAQRTD TNPDTPGFAG GWLGVGLDEW GNYSNATEGR QGGPGFRQQA 420
  421 VAIRGSESAN YQYLVGTAAN LNPKLDVRRT CQWWGCSFSG AGPGHRYFIT IDSRSGGGVW 480
  481 VRVDRSVNGT MQTVIDWHNV LSNPNQGATP ADFLLSLAGS TGASVNNHEI ENFKVCALKS 540
  541 RPVGQLIDHF RFTLPQQGLT CSASEVQIKA CANDNCSQLY TDPVTATLSP NSAPSATGGW 600
  601 LGGSQVNFNN GIATAQLRRN SVGNVSVNVL GSTPASKPFQ VNLCSYTNNP NSYSTANCTV 660
  661 NFADSGFIVD VPNAYANQTV TGTIKAVRKD NASQQCLPSF GNVQKSVAFW SEYLNPTANN 720
  721 SGFQSVSVGV NGTPIGQSAN NATSISLNFN QNGEASFPIS YREVGSLALH ARFTGSGDEQ 780
  781 DLLLEGQDSF IRVPRALVLS ANNPYNPTHP NGQCSAENIS CNVFARADEN FDLIIRAVVA 840
  841 APIEDNDFTN NLTAYNYQQQ NIALQHTLVQ PSAGQSGVLG VNEYTHLLGG TTTIAQKVSE 900
  901 VGVFDFSLFA PTHYLGLDLA SANLPIAVTS TGSIGRFIPA YFSVSPMSNV TLDAACKTGN 960
  961 AFSYLGQPFE YSNSPGLYLQ PKSANNADTQ NYLIDPWWRY NNQWNGRTYS DSANGVNLGF1020
 1021 DNLQTSPISR QALNNSGIVL NGERVWYQKP LQPKPVFNSA FDLTLNASNL TDQDGVCYRQ1080
 1081 NASSPCLGYT FSHIDGAMPL YWGKLVIQDV YGPETQASEQ PIYVEHFTNN GFVRTIEDSC1140
 1141 TALPAITGFT LQSDPNNNGY TVLTTGVAVP PQVLAEHSAA NLNSGQRAIR FSAPGAGALG1200
 1201 VIDSVLDLNA HNLLWLAEDK DGDNNFDQTT QGRAQFGLYR GSDRVIWWRE SN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle