YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229506883, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGWFMKANN AEAPDSSNAA DTLKWVATFV LLVAAVVGNY LYGELSVVAR AAGVIVLIAA  60
   61 ALGVAATTTK GKEAIVFARE SRMEVRKVVW PTRQETMQTT LIVLAVSIVM ALALWGIDGI 120
  121 MVRLVAFATG V

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	42	0.91
Non-Cytoplasmic	43	47	0.81
Transmembrane Helix	48	69	0.91
Cytoplasmic	70	98	0.88
Transmembrane Helix	99	117	0.94
Non-Cytoplasmic	118	131	0.76