YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28872706, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKKRGLGR GLDALLSSPT VSSLEEQAVK APPSELQHVP LDLIQRGKYQ PRRDMDPQAL  60
   61 EELAQSIKSQ GVMQPIVVRP IGNNRFEIIA GERRWRASQQ AGVETIPAMV RDVPDETAIA 120
  121 MALIENIQRE DLNPIEEAMA LQRLQQEFQL TQQQVADAVG KSRVSVANLL RLIALPEAIK 180
  181 TMLSHGDLEM GHARALLGLG EDRQVEGARH VVARGLTVRQ TEALVRQWLS GKPEAAEPAK 240
  241 ADPDISRLEQ RLAERLGSAV QIRHGQKGKG QLVIRYNSLD ELQGVLAHIR

Type	Start	End	Confidence
Signal Peptide	1	23	0.75
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	290	0.99