YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28872310, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAASLVSSS TRAASQSFDV RPFAGKMGAE IVGLDLSRPL NDADFARVHR AHLDHHVVVF  60
   61 RDQQITPQQQ IDFSRRFGVL QIHVLKQFLL ANHPEILIVS NIVENEKPVG LGDAGKYWHS 120
  121 DLSYKELPSL GSMLYAQELP SEGGDTLFAD MHQAWDTLPQ HLRDAVEGRS AVHSYTARYS 180
  181 EGHNAVNWRP TLTAEQLAQV VEVSHPIVRT HPENGRKALF VSEGFTTHIL GLPEDESREI 240
  241 LGELYAHSVR PEHIYRHQWQ ANDMVFWDNR SLIHLAAGCP AHLRRKLHRT TIQGTAPF

Type	Start	End	Confidence
Signal Peptide	1	15	0.65
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	298	0.99