YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28872243, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMSEWLEGL RKVDLSELDL NNMGSWPAAI KAIAGVLVAV LIFALGYFFF IQDLETQLES  60
   61 TQASEVALKE QFSNKAFQAA NLEPYRKQME EMENTFGALL RQLPSDTEVP GLLEDITRTG 120
  121 LGSGLEFEEI KLLPEAVQQF YIELPIQITV VGGYHDLATF VSGVASLPRI VTLHDFEIKP 180
  181 VDSKVPTKLR MSILAKTYRY NDEGLKK

Type	Start	End	Confidence
Cytoplasmic	1	28	0.83
Transmembrane Helix	29	51	0.91
Non-Cytoplasmic	52	207	0.84