YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28855190, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRASPILQSF KLLALTGLAV LVASCSSPSR TTSSQSPKGG AVVRTMPGLD INRAHKDGAP  60
   61 WWDVDVSRIP DATPTLHTGA YKANPYTVLG KTYFPMSDSR RYVASGTASW YGTKFHGQNT 120
  121 ANGEVYDLYG MSAAHKTLPL PSYVKVTNLD NNRTVILRVN DRGPFYSDRI IDLSYAAAKK 180
  181 LGYAESGTAR VKVEGIDPQE WWAQRGRPAP LMLNQPQVMA QATPPALSTS TGTVEQYTPP 240
  241 PQQHAAPVVP LQVDAKKNAS GQAAGLFLQV GAFANPDAAE LLRSKLSGMV RAPVFVSSIA 300
  301 RNQQTLYRVR MGPIDTPGEA QQLQNSVRSA NLGQPSVVTS DQ

Type	Start	End	Confidence
Signal Peptide	1	34	0.93
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	342	0.99