YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28871361, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNFPLLLV IAVFVCGVLA LIDLVFLAPR RRVAISNYQG SVGEPDIAVV ERLNKEPLLV  60
   61 EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLDVGDF ILVNKFSYGI RLPVLDQKVI 120
  121 ELGDPQRGDV MVFRYPSDPS VNYIKRVVGL PGDRIRYTSD KRLFINGELV AKKLIGTEPG 180
  181 TLGSAELYEE QLGTVEHQIR QEMSRYRAPP DSEWTVPAAH YFMMGDNRDN SNDSRYWDDP 240
  241 NIPKDELGMV PDKNIVGKAF AVWMSWPEPK LSHFPNFARV GLIK

Type	Start	End	Confidence
Signal Peptide	1	20	0.61
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	284	0.86