YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213926186, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANVVDHSS MWSLVSNASI VVQLVMLILV AASVTSWIVI FQRSNMLRAG RRALDSFEER  60
   61 FWSGIDLSKL YRQAGSNPDP DSGVEQIFRA GFKEFSRLRQ QSGVDPDAVM EGVARAMRVA 120
  121 ISREEEKLEA GLPYLATVGS TSPYVGLFGT VWGIMNSFRG LATAQQATLA TVAPGIAEAL 180
  181 IATAIGLFAA IPAVIAYNRF AARSETLISR YYTFADEFQA ILHRKVHTSE E

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.94
Transmembrane Helix	20	41	0.97
Cytoplasmic	42	130	0.99
Transmembrane Helix	131	154	0.86
Non-Cytoplasmic	155	175	0.85
Transmembrane Helix	176	200	0.84
Cytoplasmic	201	231	0.98