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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28871075, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIMRTVRPE VVTLFVSGLL LLGFNINLWQ HLFAITSGDG KGLAMRFAFG LMIFCVFNIF  60
   61 LTLLAFRRVF KPVVIFLFMV SASVVYFMTE YGVMIDAGMF RNFAETNVTE VQGLLSLKLV 120
  121 VYIALLGVLP SLILWKLPIS YRRWHLELFS KLVVIVVCSV AIGGVALANY QGLSSLFRNH 180
  181 HELRLMVVPS NYMGASIGYL SEQVISAQRP FVKIGEDAKR SPDWATHARK SLTVLVVGES 240
  241 ARAENFGILG YGRNTTPNLN KENGLVAFTD VYSCGTETAV SVPCMFSNMG RKNYNATKAR 300
  301 NQEGLLDVLK HAGIEVAWRD NQSGCKGTCD RVTFQDVSNL TDPLLCNSHE CRDEILLQNL 360
  361 QGFIDSLDKD TVLVLHQMGS HGPEYYKRYP KEFEKFTPVC ESNALNNCSR DSIVNAYDNT 420
  421 LLYTDHVLST LIDLLRSNQA KVDTAMVYLS DHGESLGEYN LFLHGTPYVL APDQQKHVPM 480
  481 LIWLSDTYQK SFAVTPDCLA KQRNAPLSQD NLFHSMLGLL KVDTKVYDPS LDMFAGCRSE 540
  541 LAAADKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle