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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37537172, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLPDLGVS AFINILGAFV FLLIFAALRL QPINDRVYFP KLYLTGQRRH HPHPHGFVNL  60
   61 DLCSYLRFLA WVPGALRMSQ PDLIHHAGLD SAVYLRIYTL GLKIFLPIMT VALLVLIPVN 120
  121 VSGGTLLNLR KEIVFSDIDK LSISNVNPGS NRFFIHLLMA YVFTFWTCFM LYKEYSNVAF 180
  181 MRLHFLASQK RCADQFTVIV RNIPHVSSHS TSETVDEFFR RNHPDHYLGQ QAVYNANRYA 240
  241 KLVKKKERLQ NWLDYYQLKF ERHPGKRPIG RTGCLGFCGR EVDQIDYYRA RISELDKKLA 300
  301 SERQRVLNDP KAVMPVAFVT FDSRWGAAVC AQTQQSKNPT QWLTDWAPEP RDVYWQNLAI 360
  361 PFFSLSIRKF LISIAVFALV FFYMIPIAFV QSLANLEGIE KVAPFLRPVI DTPVVKSFLQ 420
  421 GFLPGLALKI FLYILPTVLM IMSKVEGYVS LSSLERRAAS KYYYFMLVNV FLGSIIAGTA 480
  481 FEQLNAFFHQ PPSQIPRTIG VAIPMKATFF MTYIMVDGWA GIANEILRVK PLVIYHLKNM 540
  541 FIVKTERDRE RAMDPGSIGL AENLPSLQLY FLLGLVYAVV TPILLPFIII FFAFAFLVYR 600
  601 HQIINVYNQE YESAAAFWPQ VHSRIIASLL ISHVTLFGLM STMKAAYSTP LLIFLPLLTI 660
  661 WFHKYCKSRF EPAFRKYPLE EAMEKDNLER TSEPNLNLKS YLQNAYLHPI FHMFEQQQQQ 720
  721 EQEQQREEKV EVRIDKAQQH HHRQVEEEEE ESKSSQATTH YYHHHHEQTT TTTHHHYHQH 780
  781 EHMSHYHMGP SDTADSPSPP HFVYHYGVDP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle