YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28852638, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSQRPVNLD LRTIKLPVTA YTSILHRISG VILFVGIAIM LYAMDKSLAS EEGFGEVKAC  60
   61 LTSPLAKLII WGLLSALLYH MVAGIRHLIM DTGVGETLEG GKLGSKIVIA VSVVLILLAG 120
  121 VWIW

Type	Start	End	Confidence
Cytoplasmic	1	22	0.79
Transmembrane Helix	23	44	0.91
Non-Cytoplasmic	45	64	0.78
Transmembrane Helix	65	89	0.79
Cytoplasmic	90	102	0.79
Transmembrane Helix	103	123	0.94
Non-Cytoplasmic	124	124	0.84