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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37537110, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMEAAAAAA AAASDETLAA IFAQLKPHTV TLLDLIRTRT PASKSAAASS LRAMASFLRS  60
   61 APAPALQLCF EKEANASGEL DISDAIAEGG LACLEVLLTK CRLTSVNQMV ALLKKLTFGA 120
  121 MLSPSEASEE FRQGIIRCFR AMILQLHPCL DRSCSCKQAT ALSTALSFTS LEVGTIVTPK 180
  181 YSAQPEECLL AFLQSQNASA AVGHWLSLLL QSSELEASRG HRGSADVRKE SLITLRVLIG 240
  241 KVGSADALAF FLPGLVSRLG KVLYTSKNMI SGAAGSALSI EQAVLGLTEA LIVVLNDKEN 300
  301 LSELDISSVE NVALCSGGNS SSEHVLQMLR QLPAKTLSKQ IGSGEATEDV NADGSKTSAD 360
  361 RRELHVKRTK KWLEETANNV DKLLSATFPH LSIHSSEKVR RSVVNGIRVL LSSCSYTLRK 420
  421 SKMLLVECLC ILACDDAASV SEAAQDSLDY LFIEGERVLT EDDVSDIFTR FVEKLPQMVL 480
  481 GSEETTAISH ARRLLALTYY AGPQFLANYL HRSPVVAARL FDCLGLCISQ SSQFSGSMDK 540
  541 LIVSKPLSVG YLFSVAELKS GAYPKDENYG FQHAMPASTA TKISVIHDNG LPNTTHSSVD 600
  601 YELPHVPPWF VHVNSQKLYF ALAGIVRLVG LSAVSGEETS ASLSLFVDIL LDQFRRLSTE 660
  661 LRSGGQRWYM KSDAGQTLRQ ASSAVCMLNE LIYGLSDRSL SICLQIFNKN SAQMIGAPGQ 720
  721 NDQLTAFGQN NGGTNRNIWK ISEQMGTKNH IIHCIGSILH EYMAPEVWDL PTEPDSELSL 780
  781 TELNIPLYFF RDTAALHQVM IEGIGVFGVV LGQDFASSGF MHSSLYLLLR KLISSSVQIR 840
  841 IASDAVLRAL AAAGGYCSVG QFVVANADYI VDSLCRQLHH LDLNPHVPDI LASMLCYIGA 900
  901 SRDILPFLEE PMRAVSSELE VLGRHDHPHL TVPFLKAVSE VAKASRHESV SLPDEVESFF 960
  961 MKVRSEGEAI QSLIEKRRDT CAMPERMDVD AQPDFMGLEY WEDLLCKLNE MRRYRRIVGS1020
 1021 LVGSCVVAST PLLSSTKEAA CLVALDIVEN AIMSIAKVEE AYKCESRCKA VIEETIQLLS1080
 1081 VDELHDDMDA AEDVDENRLL PAVNKLWPYL VICLGNKISV SVVRKCTEVL SKVIQISGGD1140
 1141 FFVRRFHKDG SVIWRLLTLS PFQRKRMALM DEKAIILPYR NTSLTSEEPM AEISSQKIQI1200
 1201 AVLDMLAEIS SNKRSAIALG SVLKKVCGLV VGIAYSGLIG LREAAIRALT GIASIDSDLV1260
 1261 WLLMADVYYS LNQRDIPLPP KQDLVELSDL LPPPMSSREY LFVLYGGEGV RCDIDPSSVR1320
 1321 EVFKSMQDTV LT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle