YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28852415, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRWLSVLLT VPSLAWAVEP VAQAAPAQVA NTVSGGMGGQ VMQLLFGLIV VVGLIFVLAW  60
   61 VMRRVQRVGP NNGQVIELVS TRALGPRDRL VLVQIGNEQV LLGITPGRIT PLHVLKEPVH 120
  121 VPVREQTTPE FAQRLMELMG KDKDKK

Type	Start	End	Confidence
Signal Peptide	1	24	0.96
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	40	0.95
Transmembrane Helix	41	62	0.91
Cytoplasmic	63	146	0.98