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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28869162, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEATADTVP ARAGASDKKP LFGLSFLENL SEMTMLRQIG LMVGLAASVA IGFAVVLWSQ  60
   61 QPDYRPLYGS LAGMDSKQIM DTLTAANINY TVEPNSGALL VKSDDVQRAR IQLAQAGVVQ 120
  121 NDANIGFEIL DKDQGLGTSQ FMEATRYRRG LEGELARTIS ALNNVKGARV HLAIPKSSVF 180
  181 VRDDRKPSAS VLVELYAGRS LEPSQVLAII NLVATSVPEL SKSQITVVDQ KGTLLSDQAE 240
  241 NSELTMAGKQ FDYSRRMEGM LTQRVQNILQ PILGNDRYKA EVSAVVDFSA VESTAESFNP 300
  301 DQPALRSEQS VNEQRSSSSS TGGVPGALSN QPPGPATAPQ NAAAGAAGAA GPIAPGQPLL 360
  361 DANGQQIMDP ATGQPALAPY PADKRVQSTK NFELDRSISH TKQQQGRLTR LSVAVVVDDM 420
  421 VKTNAANGEV SRAPWSAADL ARFTRLVQDA VGFDASRGDS VSVINVPFSS ERAEVLPEAS 480
  481 FYSQPWFWDI VKQAVGVIFI LILVFGVLRP VLNNITSGKS KELAGFGGDA ELGGMGGLDG 540
  541 ELSNDRVSLG GPQSILLPSP TEGYDAQLNA IKSLVAEDPG RVAQVVKEWI NTDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle