YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213927892, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISRHLALE TRWLLCAIAL LCLSGTVSLA RAENFTLPEQ LIGVTQGFLE FTVEDYLATN  60
   61 QIDGRHDIQV KQLDPRLRMG ACDKDLTATL ESPRPVGRVT VRVRCEGSSP WTVFVPAQVQ 120
  121 LFRNVVTVMR PLKRDAIVTE EDIAMRERDV SSLGQGFLAS LDQAVGQKVV RQMVIDQVIT 180
  181 PVALEQPQMI HKGDQVVIIA RSGSLAVRMP GEAMSDGGFN EQIRVKNLNS QRVIKANVTG 240
  241 PGQVEVAM

Type	Start	End	Confidence
Signal Peptide	1	32	0.98
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	248	0.99