YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tr\|Q886D7\|Q886D7...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQDPPRTSR HGWVRYLLMA VGWLSVALGV IGIFLPVLPT TPFLLLAAAC FARSSARFYH  60
   61 WLINHRQLGP WIGDYLEGNG IPLKGKVYAV GMMWLSIGLS CYLVPSNWAR GFMLTSAVLV 120
  121 TIYIIRQKTL QKR

Type	Start	End	Confidence
Cytoplasmic	1	12	0.96
Transmembrane Helix	13	35	0.91
Non-Cytoplasmic	36	42	0.70
Transmembrane Helix	43	61	0.84
Cytoplasmic	62	83	0.78
Transmembrane Helix	84	104	0.79
Non-Cytoplasmic	105	107	0.71
Transmembrane Helix	108	126	0.84
Cytoplasmic	127	133	0.79