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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28851434, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSRTSRSP KKQPPRSLNK WLGWALKLGI VGLVLLGGLA IYLDAIVQEK FSGKRWTIPA  60
   61 KVYARPLELF VGQKLSRDDF LIELDALGYR RESVANGPGA AAVNGNTVDL NTRGFQFYEG 120
  121 TDAAQQVRVR FAGDSVADLS SGNGAKLAVA RLEPLLIGGL YPKNLEDRIL IKLDQAPPYL 180
  181 LDGLVAVEDR DFYHHFGVSP KSIARAIWVN TSQGQMRQGG STLTQQLVKN FYLTNERSLS 240
  241 RKLTEAMMAV LLEIHYSKQE ILEAYLNEVF VGQDGQRAVH GFGLASQYFF SQPLSELKIH 300
  301 QVAMLVGLVK GPSFYNPRRN PERAMERRNL VLDLFEQQGV ATPEVVAAAK KLPLGVTKTG 360
  361 TLADSSFPAF LDLVKRQLRE DYRDEDLTEE GLRIFTSFDP ILQMKSQAAM DDTFKKLAGR 420
  421 KGVDEVEAGM VVTNPETGEV QALIGGREAG FSGFNRAIDA VRPIGSLVKP AIYLTALERP 480
  481 SQYTLTSWIA DELFQVKGAD GQIWKPQNYD HKSHGNIFLY QGLAHSYNLS TAKLGLELGI 540
  541 PTVFKTLAKL GVTREWPAYP SMLLGAGGLS PMEVATMYQT IASGGFNTPM RGIRSVLTAE 600
  601 GEPLKRYPFK IEQRFDPGAI YLVQNAMQRV MREGTGKSVY SVLPSSLNLA GKTGTSNDSR 660
  661 DSWFAGFSQD LLAVVWMGRD DNGKTPFTGA TGALQVWTSF MRKANPLPLD MAMPDNVVQA 720
  721 WVDAQTGQGS DASCPNAVQM PYIRGSEPQP GATCGGAPAP ATEVMDWVKG WLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle