YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37536592, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSRLLSSR RLLPALLHTP SPVPIPRAAA AAAGEVGGTP VASFLRRPAR FFSSAARRGP  60
   61 ARPRATDIGA RARQLQSRRL WTYALTFGCA AGFVVTVLAT FQDQLVFYLT PTDALARYAT 120
  121 DRSKSRVRLG GLVLEGSVAH PSASSSEIEF VVTDLITDVL VRYEGALPDL FREGHSVVVE 180
  181 GFLKPFTDDL RRDTAGRKVS DKARDCECFF SATEVLAKHD EKYMPKEVGE ALERNKKKLE 240
  241 EEAAAAAAAS QESATAAVAL DGAKSSS

Type	Start	End	Confidence
Signal Peptide	1	30	0.68
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	267	0.84