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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215678662, gi...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETVDDKVS YFQAVTGISD HDLCTEILAA HNWDLQLAVS SITANPSSPD PAPSAPLPPL  60
   61 APREADLVAP HLPPPPQQQQ QQQQPGIAWK LVTLPFYVVS GGVGLIAGSI RLGAWVAGGV 120
  121 LSRSLSILGL AQGGGGGGDR LLELPPSAAE AADFVAEFER EFGAGRGPHF VAEGFADALQ 180
  181 RAQREYKLLF VYLHSPDHPD TPAFCGGCLC AEPVAAFIDE NFVAWGGSIR RTEGFKMSNS 240
  241 LNASRFPFCA VVMASTNQRI VLLRQIEGPK SPEEMITTLQ GAVEECSASL VAARIDAEER 300
  301 LNNQRLREEQ DAAYRAALEA DQARERQRRE EQEKREREAA EAERKRKEEE EAQERAAQEA 360
  361 AEKEAALARR RQEKAMALGA EPEKGPDVTR VLIRFPTGER KERRFNSSTT ITSLYDYVDS 420
  421 LDCLKAEKYS LVSNFPRVTY GPEKLSQTLE EAGLHPQASL FIEIEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle