YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXPB6_ORYSJ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARMGSKVA AILAILSVLV VHGSCKGHPV NYNVSDASAY GSGWLPARAT WYGAPTGAGP  60
   61 DDNGGACGFK NVNQYPFSSM TSCGNEPIFK DGKGCGSCYQ IRCNKDPSCS GNIETVIITD 120
  121 MNYYPVARYH FDLSGTAFGA MAKPGLNDKL RHSGIIDIQF RRVPCNYPGL KINFHVEEGS 180
  181 NPVYFAVLVE YEDLDGDVVQ VDLMESKSAY GGATGVWTPM RESWGSIWRL DSNHRLQAPF 240
  241 SLRIRSDSGK TLVANNVIPA NWSPNSNYRS IVQFS

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	275	0.99