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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31432456, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRAGALSA ARWRGGAGTG TGIGIDLRAA LRSGGNLLFA LFVAAVLAFT LLAAVHSPDD  60
   61 PLLHPSSHQL TAFLTSATSN STFLADDSVL RTGEDFAAAI GANSSDAAAA AEATVVAEAV 120
  121 PFIKLEDVAT KEESSGAERA VTVDTDASSD AGAAAEENPI VEAVSCDTEA PVDCTGDKDL 180
  181 FNLLMRTAIE KFSDLHFYRF GRPVAVPGSP MECDLAWRFR PAEDTNGRTT YYKDYRRFTL 240
  241 TRDVNTCNLV VGNVGEYHSG TGAKRSGRRK GKKGKKGKRE APVTDFVPAK TQMRLDENAA 300
  301 NADTTAASEP ELVVGEAVND NLPVVESESE FSRGKYLIYM GGGERCKSMN HYVWGFLCAL 360
  361 GEAQYLNRTL VMDLNVCLNS RYTSSGKDEE RDFRLYFDFE HLKQSASVID QSQFWTDWGK 420
  421 WHKKDRLKNH YTEDIKVTPM QLRDVKDTLI MRKFGNVEPD NFWSRVCEGE TEAVIKRPWY 480
  481 LLWKSRRLME IVSAISSRMD WDFDSVHVVR GEKAQNKQLW PNLDRDTSPD SLLTTLNDKV 540
  541 GAGRHLYIAT NEPDKSFFDP MKGKYRTHFL DDFKDLWDEN SEWYTETKEL SNGNAVEFDG 600
  601 YMRVAVDTEV FLRGKRKLET FSDLTRDCKN GVNTCPASS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle