YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|31432337, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPAATATAA LRLRAAFLSP PPPPAAAAAS AAAASRLLPR RPTASILLLP LRRLCSVPPH  60
   61 AVGDAGTGSS SQPSPVMDAQ FESFRAQLDE SSTLRDRIRA VVSEVESASR VASAALLLVH 120
  121 QPVPLADVLG KAKAQVEVIK GLYSRLAEIL KECPGQYYRY HGDWRSETQA VVSMLAFMHW 180
  181 LETGGLLMHA EAQEKLGLSS GEFGLDVEDY LTGLCFMSND FPRYVVNRVT AGDYDCPRKV 240
  241 LSFLTDLHAS FRMLNLRNDF LRKKFDGMKY DLRRVEEVYY DVKIRGLVPG ESKQEAA

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	297	0.99