YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114600282, gi...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLAAYPLK CSGPRAKVFA VLLSMVLCTV TLFLLQLKFL KPKINSFYAF EVKDAKGRTV  60
   61 SLEKYKGKVS LVVNVASDCQ LTDRNYLGLK ELHKEFGPSH FSVLAFPCNQ FGESEPRPSK 120
  121 EVESFARKNY GVTFPIFHKI KILGSEGEPA FRFLVDSSKK EPRWNFWKYL VNPEGQVVKF 180
  181 WRPEEPIEVI RPDIAALVRQ VIIKKKEDL

Type	Start	End	Confidence
Cytoplasmic	1	17	0.65
Transmembrane Helix	18	37	0.81
Non-Cytoplasmic	38	209	0.84